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Bioinformatics at the Medical Library

Nov 12, 2018

Simbonis Fellowship in Bioinformatics at the Cushing/Whitney Medical Library Yale University, New Haven, CT   Fixed Duration Position: 18 months from date of hire; non-renewable Yale University offers an exciting opportunity for achievement and growth in New Haven, Connecticut. Conveniently located between Boston and New York, New Haven is the creative capital of Connecticut with cultural resources that include major art museums, theaters and music. New Haven is also a biotech and research hub... Read More

Oct 19, 2017

You probably know that the Cushing/Whitney Medical Library offers support for bioinformatics projects, but do you know exactly where we fit into the high-throughput omics research data cycle? In this new video produced by CWML staff, you can see a sampling of the tools and services we offer throughout the process. Highlighted resources include: Qlucore Omics Explorer, a tool that facilitates a dynamic analysis of omics data, applicable to various phases of a discovery cycle. Qlucore helps you... Read More

Mar 27, 2017

Due to product updates, IPA will be unavailable from 8pm on Friday, March 31 through Sunday, April 2 at 3pm. 

Jan 11, 2017

(by Rolando Garcia Milian) Qlucore Omics Explorer facilitates a dynamic, visualization-guided analysis of OMICs data, applicable to various phases of a discovery cycle. What differentiates Qlucore is the combination of speed, advanced analytics, seamless workflow, and simplicity. With Qlucore you can visualize, QC, apply statistics, and create publication-ready graphics, such as 3D Principal Component Analysis, heat maps, and various 2D plots. For biological exploration, GO and enrichment... Read More

Jan 10, 2017

The Cushing/Whitney Medical Library has recently licensed Pharmaprojects from Informa PLC.  Pharmaprojects lets researchers track the progress of drugs from bench to patient by exploring drug development by global and country development status, and therapeutic class status. This database covers the progress of new drug candidates as they enter commercial pharmaceutical research and development programs, and tracks their progress from early preclinical development right up to market launch, or... Read More

Sep 19, 2016

Cushing/Whitney Medical Library has organized these four workshops, two of them on high-throughput data analysis tools and two on NCBI public databases. Although these are free and open to any Yale affiliate, registration is required due to limited seating.   Title:      NGS Data Analysis in Partek® Software: Onsite Workshop Registration: http://schedule.yale.edu/event/2819565 Description:    Morning Session (Overview, Hands On: Analysis on RNA-Seq Data): 9:00AM – 12:00PM Free access to Partek... Read More

Sep 6, 2016

The Yale Medical Library is offering a number of bioinformatics training session this Fall. These sessions are free and open to any Yale affiliate but registration is required due to limited seating. Please contact Rolando.milian@yale.edu  for questions or comments.   Title: The VERY Basics of the Unix Command Line Registration required: http://schedule.yale.edu/event/2800083 A lot of biomedical software programs do not come with a graphical user interface (GUI), and a Unix command-line... Read More

Jul 8, 2016

The Yale Medical Library is providing access to Partek Flow, a Graphical User Interface and user-friendly software for the analysis of RNA, SmallRNA, and DNA sequencing experiments. A webinar showing how to use this software will take place in SHM C-103 on August 4, 2016 (see details below). Webinar: NGS Data Analysis in Partek Software Registration here Description: Why have over 5,000 scientific articles cited Partek software for turning their data into discovery? Because it empowers... Read More

Apr 25, 2016

The Day of Data 2016 Spring Discussion Series will feature Dr. Alexander Cloninger. Dr. Cloninger has active applied collaborations with medical researchers at the Center for Outcomes Research and Evaluation at Yale and the National Institutes of Health. His current research deals with defining and analyzing patient similarity for the purposes of clustering and outcome prediction. Thursday, May 5, 2016 1:30 – 3:00 pm Sterling Memorial Library Lecture Hall Alex Cloninger is a Gibbs... Read More

Apr 20, 2016

The End-user Bioinformatics Program at the Yale Cushing/Medical Library is hosting these four workshops on tools for the analysis of NGS data. Besides the two trainings on tools for functional analysis of NGS data already supported by the Medical Library (Ingenuity Pathway Analysis and MetaCore), we will have a presentation on Partek Flow, and another one on CLC Bio (QIAGEN). The medical library will ask for feedback on these tools for future support and licensing. If you are interested in... Read More